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Deep Learning on Tabular Data

Reference for classification-model-selector · 36 lines

AI & Machine Learning / Classical Machine Learningv1.0.0Updated OCT 25 20264 references2 scripts

The default answer

Gradient-boosted trees remain the strongest general choice for medium-sized tabular data (thousands to millions of rows, heterogeneous features). Several benchmark studies (Grinsztajn et al. 2022, "Why do tree-based models still outperform deep learning on tabular data?"; Shwartz-Ziv & Armon 2021) found GBMs ahead on most datasets at a fraction of the tuning cost. Reasons: tabular features are heterogeneous and non-smooth, many are uninformative, and trees are invariant to monotone transforms.

When neural networks are worth trying

SituationWhy NN can help
Very large data (10M+ rows) with complex interactionscapacity, minibatch training
Mixed modalities (tabular + text/images)one model with embeddings for each
Very high-cardinality IDs with lots of data (users, items)learned embeddings
Online / continual learningincremental updates
Ensembling with GBMsdiversity often gives small gains
Small data with strong priors (in-context foundation models)TabPFN-style models trained on synthetic tasks can be strong on small tables

What to try (in order of effort)

  1. MLP with good preprocessing: quantile-transformed numerics, embeddings for categoricals, dropout, weight decay, early stopping. A well-tuned MLP is a reasonable NN baseline.
  2. Residual MLP / FT-Transformer (feature tokenisation + transformer) from libraries such as rtdl / PyTorch Tabular.
  3. Pretrained tabular foundation models (TabPFN family) for small datasets: check size limits and licence.

Practical rules

  • Compare against a tuned GBM with the same folds and tuning budget.
  • Scale inputs (QuantileTransformer works well); handle missing values explicitly.
  • Expect more tuning and compute; budget it before starting.
  • If a NN wins by a small margin, consider whether the operational cost (GPU, serving, monitoring) is worth it.
More in Classical Machine Learning

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